Package: recluster
Type: Package
Title: Ordination Methods for the Analysis of Beta-Diversity Indices
Version: 3.4
Date: 2026-01-25
Depends: R (>= 4.0.0)
Imports: alphahull, ape, sf, sp, vegan, grDevices, graphics, stats,
        utils, phytools, phangorn, picante, cluster, plotrix
Authors@R: c(
    person(given = "Leonardo", family = "Dapporto",
           role = c("aut", "cre"),
           email = "leondap@gmail.com"),
    person(given = "Matteo", family = "Ramazzotti",
           role = "aut"),
    person(given = "Simone", family = "Fattorini",
           role = "aut"),
    person(given = "Roger", family = "Vila",
           role = "aut"),
    person(given = "Gerard", family = "Talavera",
           role = "aut"),
    person(given = c("Roger", "H.L."), family = "Dennis",
           role = "aut")
    )
Maintainer: Leonardo Dapporto <leondap@gmail.com>
Description: The analysis of different aspects of biodiversity requires
        specific algorithms. For example, in regionalisation analyses,
        the high frequency of ties and zero values in dissimilarity
        matrices produced by Beta-diversity turnover produces
        hierarchical cluster dendrograms whose topology and bootstrap
        supports are affected by the order of rows in the original
        matrix. Moreover, visualisation of biogeographical
        regionalisation can be facilitated by a combination of
        hierarchical clustering and multi-dimensional scaling. The
        recluster package provides robust techniques to visualise and
        analyse patterns of biodiversity and to improve occurrence data
        for cryptic taxa.
License: GPL (>= 2.0)
LazyLoad: yes
URL: https://github.com/leondap/recluster
NeedsCompilation: no
Encoding: UTF-8
RoxygenNote: 7.2.3
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libglpk-dev libxml2-dev libssl-dev libproj-dev libsqlite3-dev
        libudunits2-dev
Repository: https://leondap.r-universe.dev
Date/Publication: 2026-06-22 07:46:04 UTC
RemoteUrl: https://github.com/leondap/recluster
RemoteRef: HEAD
RemoteSha: 51c434b863ca95df5baf18f6615f90e597424163
Packaged: 2026-06-22 09:24:41 UTC; root
Author: Leonardo Dapporto [aut, cre],
  Matteo Ramazzotti [aut],
  Simone Fattorini [aut],
  Roger Vila [aut],
  Gerard Talavera [aut],
  Roger H.L. Dennis [aut]